DocumentCode :
2442516
Title :
Altering steady-state probabilities in probabilistic Boolean networks
Author :
Pal, Ravindra ; Datta, Amitava ; Dougherty, Edward R.
Author_Institution :
Electr. & Comput. Eng., Texas A & M Univ., College Station, TX
fYear :
2006
fDate :
28-30 May 2006
Firstpage :
75
Lastpage :
76
Abstract :
External control of a genetic regulatory network is used for the purpose of avoiding undesirable states, such as those associated with disease. Heretofore, intervention has focused on finite-horizon control, i.e., control over a small number of stages. This paper considers the design of optimal infinite-horizon control for probabilistic Boolean networks (PBNs). The stationary policy obtained is independent of time and dependent on the current state. The average-cost-per-stage problem formulation is used to generate the stationary policy for a PBN constructed from melanoma gene-expression data. The results show that the stationary policiy obtained is capable of shifting the probability mass of the stationary distribution from undesirable states to desirable ones.
Keywords :
biocontrol; cellular biophysics; diseases; genetics; medical diagnostic computing; disease; genetic regulatory network; melanoma gene-expression data; optimal infinite horizon control; probabilistic Boolean networks; steady-state probabilities; Bioinformatics; Computer networks; Cost function; Diseases; Genetic algorithms; Genetic engineering; Genomics; H infinity control; Intelligent networks; Steady-state;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Genomic Signal Processing and Statistics, 2006. GENSIPS '06. IEEE International Workshop on
Conference_Location :
College Station, TX
Print_ISBN :
1-4244-0384-7
Electronic_ISBN :
1-4244-0385-5
Type :
conf
DOI :
10.1109/GENSIPS.2006.353163
Filename :
4161784
Link To Document :
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