DocumentCode :
2497689
Title :
Towards neuro-silicon interface using reconfigurable dynamic clamping
Author :
Luo, Jun Wen ; Mak, Terrence ; Yu, Bo ; Andras, Peter ; Yakovlev, Alex
Author_Institution :
Sch. of Electr., Electron. & Comput. Eng., Newcastle Univ., Newcastle upon Tyne, UK
fYear :
2011
fDate :
Aug. 30 2011-Sept. 3 2011
Firstpage :
6389
Lastpage :
6392
Abstract :
Dynamic clamp emerges as an important apparatus to study the intrinsic neuronal properties through close-loop interactions between models and biological neurons. Modelling large-scale neuronal networks in software will result in significant computational delay that becomes a bottleneck to apply dynamic clamp for more complicated systems. In this paper, we present a real-time dynamic clamping system based on field programmable gate arrays (FPGAs) to accelerate the necessary computations. It also provides a flexible platform to reconfigure various model parameters and topologies. Realtime neuronal and synaptic models were implemented in FPGA, and interconnected with the stomatograstric ganglion (STG) nervous system to exemplify the real-time dynamics. Results show that our method can be effectively configured to mimic various biological neural networks and is two orders of magnitude faster than software approach using desktop computer.
Keywords :
biocybernetics; cellular biophysics; closed loop systems; field programmable gate arrays; neural nets; neurophysiology; FPGA; STG nervous system; biological neural networks; biological neurons; close loop interactions; field programmable gate arrays; intrinsic neuronal properties; large scale neuronal networks; neuronal models; neurosilicon interface; real time dynamic clamping system; reconfigurable dynamic clamping; stomatograstric ganglion nervous system; synaptic models; Biological system modeling; Clamps; Computational modeling; Electric potential; Field programmable gate arrays; Neurons; Animals; Brachyura; Communication; Equipment Design; Ganglion Cysts; Humans; Man-Machine Systems; Materials Testing; Nervous System; Neural Networks (Computer); Neurons; Self-Help Devices; Silicon; Software; Stomach; Time Factors;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Engineering in Medicine and Biology Society, EMBC, 2011 Annual International Conference of the IEEE
Conference_Location :
Boston, MA
ISSN :
1557-170X
Print_ISBN :
978-1-4244-4121-1
Electronic_ISBN :
1557-170X
Type :
conf
DOI :
10.1109/IEMBS.2011.6091577
Filename :
6091577
Link To Document :
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