• DocumentCode
    2497689
  • Title

    Towards neuro-silicon interface using reconfigurable dynamic clamping

  • Author

    Luo, Jun Wen ; Mak, Terrence ; Yu, Bo ; Andras, Peter ; Yakovlev, Alex

  • Author_Institution
    Sch. of Electr., Electron. & Comput. Eng., Newcastle Univ., Newcastle upon Tyne, UK
  • fYear
    2011
  • fDate
    Aug. 30 2011-Sept. 3 2011
  • Firstpage
    6389
  • Lastpage
    6392
  • Abstract
    Dynamic clamp emerges as an important apparatus to study the intrinsic neuronal properties through close-loop interactions between models and biological neurons. Modelling large-scale neuronal networks in software will result in significant computational delay that becomes a bottleneck to apply dynamic clamp for more complicated systems. In this paper, we present a real-time dynamic clamping system based on field programmable gate arrays (FPGAs) to accelerate the necessary computations. It also provides a flexible platform to reconfigure various model parameters and topologies. Realtime neuronal and synaptic models were implemented in FPGA, and interconnected with the stomatograstric ganglion (STG) nervous system to exemplify the real-time dynamics. Results show that our method can be effectively configured to mimic various biological neural networks and is two orders of magnitude faster than software approach using desktop computer.
  • Keywords
    biocybernetics; cellular biophysics; closed loop systems; field programmable gate arrays; neural nets; neurophysiology; FPGA; STG nervous system; biological neural networks; biological neurons; close loop interactions; field programmable gate arrays; intrinsic neuronal properties; large scale neuronal networks; neuronal models; neurosilicon interface; real time dynamic clamping system; reconfigurable dynamic clamping; stomatograstric ganglion nervous system; synaptic models; Biological system modeling; Clamps; Computational modeling; Electric potential; Field programmable gate arrays; Neurons; Animals; Brachyura; Communication; Equipment Design; Ganglion Cysts; Humans; Man-Machine Systems; Materials Testing; Nervous System; Neural Networks (Computer); Neurons; Self-Help Devices; Silicon; Software; Stomach; Time Factors;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, EMBC, 2011 Annual International Conference of the IEEE
  • Conference_Location
    Boston, MA
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-4121-1
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2011.6091577
  • Filename
    6091577