• DocumentCode
    2498715
  • Title

    Evaluating descriptors for the lateral translocation of membrane proteins

  • Author

    Domanova, Olga ; Borbe, Stefan ; Mühlfeld, Stefanie ; Becker, Martin ; Kubitz, Ralf ; Häussinger, Dieter ; Berlage, Thomas

  • Author_Institution
    Fraunhofer Inst. for Appl. Inf. Technol. FIT, St. Augustin, Germany
  • fYear
    2011
  • fDate
    Aug. 30 2011-Sept. 3 2011
  • Firstpage
    6597
  • Lastpage
    6600
  • Abstract
    Microscopic images of tissue sections are used for diagnosis and monitoring of therapy, by analysis of protein patterns correlating to disease states. Spatial protein distribution is influenced by protein translocation between different membrane compartments and quantified by comparison of microscopic images of biological samples. Cholestatic liver diseases are characterized by translocation of transport proteins, and quantification of their dislocation offers new diagnostic options. However, reliable and unbiased tools are lacking. The nowadays used manual method is slow, subjective and error-prone. We have developed a new workflow based on automated image analysis and improved it by the introduction of scale-free descriptors for the translocation quantification. This fast and unbiased method can substitute the manual analysis, and the suggested descriptors perform better than the earlier used statistical variance.
  • Keywords
    biological tissues; biomedical optical imaging; biomembranes; diseases; liver; medical image processing; molecular biophysics; physiological models; proteins; automated image analysis; cholestatic liver diseases; lateral translocation; membrane proteins; microscopic images; protein translocation; scale-free descriptors; statistical variance; tissue sections; Biomembranes; Irrigation; Liver; Manuals; Microscopy; Proteins; Animals; Automatic Data Processing; Automation; Bile Acids and Salts; Cell Membrane; Cholestasis; Computational Biology; Drug Design; Humans; Image Processing, Computer-Assisted; Liver; Membrane Proteins; Microvilli; Models, Biological; Models, Theoretical; Protein Transport; Rats; Signal Processing, Computer-Assisted;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, EMBC, 2011 Annual International Conference of the IEEE
  • Conference_Location
    Boston, MA
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-4121-1
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2011.6091627
  • Filename
    6091627