DocumentCode
2507115
Title
Gene expression profiling towards the prediction of oral cancer reoccurrence
Author
Exarchos, Konstantinos P. ; Goletsis, Yorgos ; Poli, Tito ; Fotiadis, Dimitrios I.
Author_Institution
Dept. of Mater. Sci. & Eng., Univ. of Ioannina, Ioannina, Greece
fYear
2011
fDate
Aug. 30 2011-Sept. 3 2011
Firstpage
8307
Lastpage
8310
Abstract
In this work we perform gene expression profiling on tissue specimen obtained from patients with oral squamous cell carcinoma with a twofold aim: i) to identify a limited number of genes that capture perturbations at molecular level dictating the development of a potential disease relapse after remission, and ii) to employ these genes in order to build a classifier that is able to calculate the probability of disease reoccurrence for new patients, subsequently discriminating patients into high and low risk groups based on reoccurrence probability. The proposed analysis yielded 94% overall accuracy, 100% sensitivity and 89% specificity, for discriminating patients with and without a disease relapse.
Keywords
biological tissues; cancer; cellular biophysics; genetics; probability; disease relapse; gene expression profiling; molecular level; oral cancer reoccurrence; oral squamous cell carcinoma; probability; tissue specimen; Artificial neural networks; Classification algorithms; Diseases; Gene expression; Metastasis; Neck; Algorithms; Gene Expression Profiling; Gene Expression Regulation, Neoplastic; Genes, Neoplasm; Humans; Mouth Neoplasms; Neoplasm Recurrence, Local;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, EMBC, 2011 Annual International Conference of the IEEE
Conference_Location
Boston, MA
ISSN
1557-170X
Print_ISBN
978-1-4244-4121-1
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2011.6092048
Filename
6092048
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