• DocumentCode
    2514634
  • Title

    Identifying MiRNA and Imaging Features Associated with Metastasis of Lung Cancer to the Brain

  • Author

    Nasser, Sara ; Ranade, Aarati R. ; Sridhart, Shravan ; Haney, Lisa ; Korn, Ronald L. ; Gotway, Michael B. ; Weiss, Glen J. ; Kim, Seungchan

  • Author_Institution
    Biocomputing Unit, Transiational Genomics Res. Inst. Phoenix, Phoenix, AZ, USA
  • fYear
    2009
  • fDate
    1-4 Nov. 2009
  • Firstpage
    246
  • Lastpage
    251
  • Abstract
    MicroRNAs are small non-coding RNAs of 21-25 nucleotides that might impact regulatory mechanisms in cancer. Due to their influence on cell physiology, alteration of miRNA regulation can be implicated in carcinogenesis and disease progression. In general, one miRNA is predicted to regulate several hundred genes, and as a result, miRNA profiling could serve as a better classifier than gene expression profiling.More than 50% of brain metastasis (brain mets) are associated with non-small cell lung cancer (NSCLC). As miRNAs can regulate certain genes, the presence or absence of certain miRNA could lead to oncogene potential for brain mets. In this study, we combine validated miRNA expression values with imaging features to separate NSCLC brain mets from non-brain mets and identify biomarkers that may indicate possibility of brain mets. This research involves comprehensive miRNA expression profiling, validation of miRNA with qRT-PCR, correlation of miRNA with imaging features such as PET/CT and CT scan. Eleven statistically significant miRNA were identified and matched with imaging features to yield a class separation of brain mets and non-brain mets.
  • Keywords
    brain; cancer; cellular biophysics; feature extraction; genetics; lung; molecular biophysics; positron emission tomography; CT scan; MiRNA; PET; biomarkers; brain; brain mets; carcinogenesis; cell physiology; class separation; disease progression; gene expression profiling; imaging features; lung cancer; metastasis; microRNAs; nonbrain mets; nucleotides; oncogene potential; Biomarkers; Cancer; Computed tomography; Diseases; Gene expression; Lungs; Metastasis; Physiology; Positron emission tomography; RNA; PET/CT Scan; in-silico conditioning; miRNA; non-small cell lung cancer;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine, 2009. BIBM '09. IEEE International Conference on
  • Conference_Location
    Washington, DC
  • Print_ISBN
    978-0-7695-3885-3
  • Type

    conf

  • DOI
    10.1109/BIBM.2009.64
  • Filename
    5341798