• DocumentCode
    2515603
  • Title

    Parameter Estimation for Nonlinear Biological System Model Based on Global Sensitivity Analysis

  • Author

    Jia, Jianfang

  • Author_Institution
    Sch. of Inf. & Commun. Eng., North Univ. of China, Taiyuan, China
  • fYear
    2009
  • fDate
    11-13 June 2009
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Mathematical models of cell signal transduction networks are normally highly nonlinear and complex, which consist of a large number of reaction species and kinetics parameters. An important problem of systems biology is to develop mathematical models of nonlinear biological systems, and to effectively estimate the unknown parameters. In this work, a novel algorithm to estimate parameters based on global sensitivity analysis is proposed, and extended Kalman filter is applied to estimate the unknown sensitive parameters of signaling transduction networks model. Taking an IkappaBalpha~-NF-kappaB signaling pathway model as an example, simulation analysis demonstrates that the algorithm can well estimate the unknown parameters under the disturbs of the noise, and it provides an efficient method for solving the parameters´ uncertainty effects of biological pathways.
  • Keywords
    Kalman filters; biochemistry; biology computing; cellular biophysics; filtering theory; reaction kinetics theory; cell signal transduction networks; extended Kalman filter; global sensitivity analysis; kinetics parameters; mathematical models; nonlinear biological system model; parameter estimation; reaction species; signaling pathway model; Algorithm design and analysis; Analytical models; Biological system modeling; Biological systems; Kinetic theory; Mathematical model; Parameter estimation; Sensitivity analysis; Signal analysis; Systems biology;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
  • Conference_Location
    Beijing
  • Print_ISBN
    978-1-4244-2901-1
  • Electronic_ISBN
    978-1-4244-2902-8
  • Type

    conf

  • DOI
    10.1109/ICBBE.2009.5163168
  • Filename
    5163168