Title :
Semi-Parametric Polynomial Inverse Regression for Dimension Reduction and Its Application in Microarray Data
Author :
Zhang Guofen ; Zhang Yan
Author_Institution :
Inst. of Stat., Zhejiang Univ., Hangzhou, China
Abstract :
As the development of the gene microarray technology, the contradiction between number of genes and sample size has become more apparent, high-dimension independent variables also challenge the traditional nonparametric methods. A new method for dimension reduction, semi-parametric polynomial inverse regression (SPPIR), based on sliced inverse regression is proposed. By simulation, we demonstrate how SPPIR can reduce the dimension of the input variables effectively. In the end, we conduct SPPIR and discriminant analysis for a tumor gene microarray data. By comparing with other methods, the effectiveness of dimension reduction methods can be seen.
Keywords :
cancer; genetics; lab-on-a-chip; molecular biophysics; nonparametric statistics; polynomials; regression analysis; tumours; dimension reduction method; discriminant analysis; gene microarray technology; high-dimension independent variable; semiparametric polynomial inverse regression; traditional nonparametric method; tumor gene; Independent component analysis; Information retrieval; Input variables; Neoplasms; Parametric statistics; Polynomials; Principal component analysis; Regression analysis; Regression tree analysis; Smoothing methods;
Conference_Titel :
Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
Conference_Location :
Beijing
Print_ISBN :
978-1-4244-2901-1
Electronic_ISBN :
978-1-4244-2902-8
DOI :
10.1109/ICBBE.2009.5163378