• DocumentCode
    2520753
  • Title

    Structure of Stearoyl ACP Desaturase of Pistacia Chinensis and Other Plants Was Predicted by Bioinformatics Methods

  • Author

    Shi, Ming-wang ; Song, Hong-wei ; Zhang, Jiang-tao

  • Author_Institution
    Key Lab. of Forest Germplasm Conservation, Selection & Breeding of Improved Variety, Zhengzhou, China
  • fYear
    2009
  • fDate
    11-13 June 2009
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Protein structure prediction by using bioinformatics can involve sequence similarity searches, multiple sequence alignments, identification and characterization of domains, secondary structure prediction. The secondary and tertiary structure of stearoyl ACP desaturase was predicted by bioinformatics methods from the mRNA sequence. The stearoyl ACP protein, as a member of plant fatty acid synthesis protein, reported by several plant species of Arabidopsis, Pistacia Chinensis , Brassica nap,Eudicots, Malpighiales ,Fabales, Solanales, Malvales, Cucurbitales, Lamiales, Apiales and Poales, this protein exhibits an important effect for fatty acid synthesize reaction. Using bioinformatics analysis of resource category gene function of stearoyl ACP protein, to study protein structure, to clone the full-length of a differentially expressed cDNA fragment, stearoyl ACP desaturase and others 84 stearoyl ACP desaturase, and study its biological function tentatively for plant fatty acid synthetase mechanisms. A combination of bioinformatics methods of prediction of fatty acid-related proteins in higher oil plants {Pistacia chinensis), and then combining the experiment demonstrated will be of great theoretical and scientific value.
  • Keywords
    bioinformatics; botany; macromolecules; molecular biophysics; molecular configurations; proteins; proteomics; Pistacia Chinensis; bioinformatics; fatty acid synthesize reaction; mRNA sequence; protein structure prediction; resource category gene function; stearoyl ACP desaturase; Amino acids; Bioinformatics; Biological information theory; Biological materials; Biomass; Laboratories; Materials science and technology; Petroleum; Proteins; Sequences;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering , 2009. ICBBE 2009. 3rd International Conference on
  • Conference_Location
    Beijing
  • Print_ISBN
    978-1-4244-2901-1
  • Electronic_ISBN
    978-1-4244-2902-8
  • Type

    conf

  • DOI
    10.1109/ICBBE.2009.5163435
  • Filename
    5163435