Title :
PERCEPTUAL GROUPING OF MEMBRANE SIGNALS IN CELL-BASED ASSAYS
Author :
Chang, H. ; Andarawewa, K.L. ; Han, J. ; Barcellos-Hoff, M.H. ; Parvin, B.
Author_Institution :
Lawrence Berkeley Nat. Lab., CA
Abstract :
Membrane proteins organize themselves in a linear fashion where adjacent cells are attached together along the basal-lateral region. Their intensity distributions are often heterogeneous and may lack specificity. Grouping of these linear structures can aid in segmentation and quantitative representation of protein localization. However, quantitative analysis of these signals is often hindered by noise, variation in scale, and perceptual features. This paper introduces an iterative voting method for inferring the membrane signal as it relates to continuity. A unique aspect of this technique is in the topography of the voting kernel, which is refined and reoriented iteratively. The technique can cluster and group membrane signals along the tangential direction. It has an excellent noise immunity and is tolerant to perturbations in scale. Application of this technique to quantitative analysis of cell-cell adhesion mediated by integral cell membrane proteins is demonstrated
Keywords :
adhesion; biomembranes; cellular biophysics; gynaecology; image segmentation; iterative methods; medical image processing; molecular biophysics; proteins; basal-lateral region; cell attachment; cell-based assays; cell-cell adhesion; integral cell membrane proteins; intensity distributions; iterative reorientation; iterative voting method; mammary epithelial cells; membrane proteins; membrane signals; noise immunity; perceptual grouping; protein localization; protein segmentation; voting kernel topography; Adhesives; Biomembranes; Cancer; Cells (biology); Kernel; Proteins; Shape; Solid modeling; Surfaces; Voting;
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on
Conference_Location :
Arlington, VA
Print_ISBN :
1-4244-0672-2
Electronic_ISBN :
1-4244-0672-2
DOI :
10.1109/ISBI.2007.356906