Title :
Protein Secondary Structure Prediction based on BP Neural Network and Quasi-Newton Algorithm
Author :
Wang, Jian ; Li, Jian-Ping
Author_Institution :
Sch. of Comput. & Inf. Sci., Neijiang Normal Univ., Neijiang
Abstract :
Based on neural network, an improvement scheme that iterative matrix replace secondary derivative has been developed by introduced quasi-Newton algorithm. Profile code based on probability has been used and comparison of window width and learning training has been completed. The experiment results indicate that the prediction for secondary structures of protein obtain a very good effect based on neural network and quasi-Newton algorithm.
Keywords :
backpropagation; biology computing; iterative methods; matrix algebra; neural nets; BP neural network; iterative matrix; protein secondary structure prediction; quasi-Newton algorithm; Accuracy; Amino acids; Convergence; Databases; Iterative algorithms; Neural networks; Neurons; Potential well; Prediction methods; Proteins; BP neural network; Quasi-Newton algorithm; prediction; protein secondary structure;
Conference_Titel :
Apperceiving Computing and Intelligence Analysis, 2008. ICACIA 2008. International Conference on
Conference_Location :
Chengdu
Print_ISBN :
978-1-4244-3427-5
Electronic_ISBN :
978-1-4244-3426-8
DOI :
10.1109/ICACIA.2008.4769988