Title :
Inferring neutral evolution from Parkinson´s disease genes
Author :
Pang, Gavyn W L ; Rajapakse, Jagath C.
Author_Institution :
Bioinformatics Res. Inst., Nanyang Technol. Univ., Singapore
Abstract :
Comparative analysis of evolutionary rates of different species provides us with informative results as to how nucleotides mutate in species with different divergence times. Relative rate test is frequently deployed to test rates of synonymous and nonsynonymous substitutions. We are interested to use the test on a set of genes which are related to the Parkinson´s Disease. Comparative genomics of human, chimp, mouse, chicken and fugu revealed most of the genes did not provide evidence of a rate heterogeneity, thereby inferring most of them are undergoing neutral or nearly neutral mutation. This allows us to get a better understanding of the evolutionary traits of genes implicated in Parkinson´s Disease.
Keywords :
biochemistry; diseases; evolution (biological); genetics; medical computing; molecular biophysics; Parkinson disease genes; chicken; chimp; comparative genomics; divergence times; evolutionary rates; fugu; mouse; neutral evolution; nucleotides mutation; relative rate test; Bioinformatics; DNA; Evolution (biology); Genetic mutations; Genomics; Humans; Neurons; Parkinson´s disease; Sequences; Testing;
Conference_Titel :
Computational Intelligence in Bioinformatics and Computational Biology, 2004. CIBCB '04. Proceedings of the 2004 IEEE Symposium on
Print_ISBN :
0-7803-8728-7
DOI :
10.1109/CIBCB.2004.1393940