Title :
SIB: Database and Tool for the Integration and Browsing of Large Scale Image Hhigh-Throughput Screening Data
Author :
Kozak, Karol ; Kozak, Marta ; Krausz, Eberhard
Author_Institution :
Max Planck Inst. of Molecular Cell Biol. & Genetics, Dresden
Abstract :
Data management has become one of the central issues in high-throughput biological screening. In particular high-throughput screening (HTS), applying automated microscopy, requires a system which is capable of storing and analyzing vast amounts of image and numeric data. These data include comprehensive information about the bioactive molecules, the targeted genes, and images as well as their extracted data matrices after acquisition. Here we present a Web-based bioinformatics solution for the management of images from different screening microscopes: the screening image browser (SIB). The following points describe this tool as well as an image retrieval mechanism, both working as a framework for browsing and analyzing screening information. A major outcome of this database is a unique, fully operational, distributed digital library of screening image data accessible to researchers. SIB is a scientific database that enables effective data management accessible through a standard Web-browser interface. The application utilizes a robust security architecture and is designed for efficient data exploration
Keywords :
Internet; biology computing; data handling; scientific information systems; visual databases; Web bioinformatics solution; Web-browser interface; automated microscopy; data exploration; data matrix; distributed digital library; high-throughput biological screening; image data management; image data screening; image high-throughput screening data; image retrieval; information analysis; information browsing; scientific database; screening image browser; screening microscope; Bioinformatics; Data mining; High temperature superconductors; Image analysis; Image databases; Image retrieval; Information analysis; Information retrieval; Large scale integration; Microscopy;
Conference_Titel :
Database and Expert Systems Applications, 2006. DEXA '06. 17th International Workshop on
Conference_Location :
Krakow
Print_ISBN :
0-7695-2641-1
DOI :
10.1109/DEXA.2006.128