• DocumentCode
    2581415
  • Title

    Discrete-time models for gene transcriptional regulation networks

  • Author

    Cacace, Filippo ; Farina, Lorenzo ; Germani, Alfredo ; Palumbo, Pasquale

  • Author_Institution
    Univ. Campus Biomedico di Roma, Rome, Italy
  • fYear
    2010
  • fDate
    15-17 Dec. 2010
  • Firstpage
    7618
  • Lastpage
    7623
  • Abstract
    The recent finding of functional motifs (by Uri Alon an co-workers) in gene regulatory networks has provided an important interpretative tool for systems biology. Despite the available models are made of continuous-time ordinary differential equations, the experimental data needed to validate such motifs in living cells are inherently discrete in time. Moreover, the technology is currently very expensive, so that an accurate choice of a limited number of samples is mandatory. In this paper we investigate the dynamical properties of network motifs under sampling and provide simple rules for choosing the appropriate sampling rate which preserves peculiar dynamical features for the most common network motifs.
  • Keywords
    differential equations; discrete time systems; genetics; continuous-time ordinary differential equations; discrete-time models; gene transcriptional regulation networks; living cells; molecular cell biology; network motifs; systems biology; Computational modeling; Delay; Gene expression; Jacobian matrices; Mathematical model; Proteins; Steady-state; biological systems; discrete-time systems; gene transcription networks; nonlinear systems;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Decision and Control (CDC), 2010 49th IEEE Conference on
  • Conference_Location
    Atlanta, GA
  • ISSN
    0743-1546
  • Print_ISBN
    978-1-4244-7745-6
  • Type

    conf

  • DOI
    10.1109/CDC.2010.5717984
  • Filename
    5717984