DocumentCode
2581415
Title
Discrete-time models for gene transcriptional regulation networks
Author
Cacace, Filippo ; Farina, Lorenzo ; Germani, Alfredo ; Palumbo, Pasquale
Author_Institution
Univ. Campus Biomedico di Roma, Rome, Italy
fYear
2010
fDate
15-17 Dec. 2010
Firstpage
7618
Lastpage
7623
Abstract
The recent finding of functional motifs (by Uri Alon an co-workers) in gene regulatory networks has provided an important interpretative tool for systems biology. Despite the available models are made of continuous-time ordinary differential equations, the experimental data needed to validate such motifs in living cells are inherently discrete in time. Moreover, the technology is currently very expensive, so that an accurate choice of a limited number of samples is mandatory. In this paper we investigate the dynamical properties of network motifs under sampling and provide simple rules for choosing the appropriate sampling rate which preserves peculiar dynamical features for the most common network motifs.
Keywords
differential equations; discrete time systems; genetics; continuous-time ordinary differential equations; discrete-time models; gene transcriptional regulation networks; living cells; molecular cell biology; network motifs; systems biology; Computational modeling; Delay; Gene expression; Jacobian matrices; Mathematical model; Proteins; Steady-state; biological systems; discrete-time systems; gene transcription networks; nonlinear systems;
fLanguage
English
Publisher
ieee
Conference_Titel
Decision and Control (CDC), 2010 49th IEEE Conference on
Conference_Location
Atlanta, GA
ISSN
0743-1546
Print_ISBN
978-1-4244-7745-6
Type
conf
DOI
10.1109/CDC.2010.5717984
Filename
5717984
Link To Document