DocumentCode
2633989
Title
Fluctuations in sliding motion of cytoskeltal filament driven by molecular motors
Author
Imafuku, Yasuhiro ; Mitarai, Namiko ; Tawada, Katsuhisa ; Nakanishi, Hiizu
Author_Institution
Kyushu Univ., Fukuoka
fYear
2007
fDate
11-14 Nov. 2007
Firstpage
193
Lastpage
198
Abstract
It has been found in several in vitro experiments that cytoskeletal filaments driven by molecular motors show finite diffusion in sliding movement even in the long filament limit (Imafuku et al., 1996a, 1997; Noda et al., 2005). This anomalous fluctuation can be evidence that there exists some cooperativity among the motors in action because fluctuation should be averaged out if the action of each motor is independent. In order to understand the nature of the cooperativity in existing models of molecular motors, we perform numerical simulations and analyze velocity correlation on three models that are known to show some kind of cooperativity and/or large diffusion coefficient in the long filament limit. It is shown that Prost model (1994) and Duke model (1999) do not give a finite diffusion in the long filament limit in spite of collective action of motors. Quenched randomness in Sekimoto-Tawada model (1995) has been shown to give constant diffusion coefficient independent of filament length because of long time correlation proportional to filament length, but such a long correlation time is found to conflict with the experimental time scales. We conclude that none of the three models represent experimental findings, and a mechanism to be understood should allow both the amplitude and the time scale of the velocity correlation to be independent of the filament length.
Keywords
biodiffusion; fluctuations; molecular biophysics; physiological models; cytoskeletal filament; filament length; finite diffusion; molecular motors; sliding motion fluctuations; velocity correlation; Displacement measurement; Fluctuations; In vitro; Length measurement; Motion measurement; Numerical simulation; Performance analysis; Performance evaluation; Physics; Time measurement;
fLanguage
English
Publisher
ieee
Conference_Titel
Micro-NanoMechatronics and Human Science, 2007. MHS '07. International Symposium on
Conference_Location
Nagoya
Print_ISBN
978-1-4244-1858-9
Electronic_ISBN
978-1-4244-1858-9
Type
conf
DOI
10.1109/MHS.2007.4420851
Filename
4420851
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