Title :
2-D electrophoresis gel registration using feature matching
Author :
Rogers, Mike ; Graham, Jim ; Tonge, Robert P.
Author_Institution :
Dept. of Imaging Sci. & Biomed. Eng., Manchester Univ., UK
Abstract :
We have carried out an evaluation of feature matching algorithms and developed an automatic method of 2-D electrophoresis gel registration. We show that bi-partite graph matching is not appropriate in this context, and have used a combination of shape context and euclidian distance measures together with closest point correspondence estimation in our scheme. Our final algorithm is shown to be more robust than a recently published image intensity based method.
Keywords :
biological techniques; electrophoresis; feature extraction; gels; image matching; image registration; molecular biophysics; proteins; 2-D electrophoresis gel registration; bi-partite graph matching; closest point correspondence estimation; euclidian distance measures; feature matching algorithm; proteomics; shape context measures; Biology; Biomedical engineering; Biomedical imaging; Biomedical measurements; Electrokinetics; Iterative algorithms; Iterative closest point algorithm; Protein engineering; Shape measurement; Smoothing methods;
Conference_Titel :
Biomedical Imaging: Nano to Macro, 2004. IEEE International Symposium on
Print_ISBN :
0-7803-8388-5
DOI :
10.1109/ISBI.2004.1398818