• DocumentCode
    2646666
  • Title

    Gene selection in microarray data from multi-objective perspective

  • Author

    Sabzevari, Shahram ; Abdullah, Salwani

  • Author_Institution
    Center for Artificial Intell. Technol., Univ. Kebangsaan Malaysia (UKM), Bangi, Malaysia
  • fYear
    2011
  • fDate
    28-29 June 2011
  • Firstpage
    199
  • Lastpage
    207
  • Abstract
    Microarray technology provides a platform to study expression level of thousands of genes simultaneously, but its high dimensionality and noisy nature forces the usage of dimensionality reduction techniques. Among these techniques feature selection seems to be more favorable due to its goal to preserve feature semantic. Feature selection is also called gene selection while applied to genetic data. Inherently, gene selection objectives are manifold which makes it a proper candidate for multi-objective optimization. There are three different ways to deal with fitness evaluation in multi-objective literature. Between these three the Pareto base approach seems to deliver more promising advantages to the biologist, but it did not grab that much attention till now, probably due to its computational complexity. The intention of this paper is to provide an insight to gene selection problem from multi-objective perspective. Although, covering all the proposed methods are impossible, but hopefully those algorithms discussed here are enough to show the common trend in multi-objective gene selection in microarray data.
  • Keywords
    biology computing; computational complexity; data reduction; optimisation; computational complexity; dimensionality reduction techniques; feature selection; gene selection; microarray data; multiobjective optimization; Classification algorithms; Gene expression; Genetic algorithms; Information filters; Optimization; Feature selection; Gene selection; Microarray; Multi-objective optimization; Pareto optimality;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Data Mining and Optimization (DMO), 2011 3rd Conference on
  • Conference_Location
    Putrajaya
  • ISSN
    2155-6938
  • Print_ISBN
    978-1-61284-211-0
  • Electronic_ISBN
    2155-6938
  • Type

    conf

  • DOI
    10.1109/DMO.2011.5976528
  • Filename
    5976528