• DocumentCode
    2662740
  • Title

    Exploiting Lustre File Joining for Effective Collective IO

  • Author

    Yu, Weikuan ; Vetter, Jeffrey ; Canon, R. Shane ; Jiang, Song

  • Author_Institution
    Oak Ridge Nat. Lab., Oak Ridge, TN
  • fYear
    2007
  • fDate
    14-17 May 2007
  • Firstpage
    267
  • Lastpage
    274
  • Abstract
    Lustre is a parallel file system that presents high aggregated IO bandwidth by striping file extents across many storage devices. However, our experiments indicate excessively wide striping can cause performance degradation. Lustre supports an innovative file joining feature that joins files in place. To mitigate striping overhead and benefit collective IO, we propose two techniques: split writing and hierarchical striping. In split writing, a file is created as separate subfiles, each of which is striped to only a few storage devices. They are joined as a single file at the file close time. Hierarchical striping builds on top of split writing and orchestrates the span of subfiles in a hierarchical manner to avoid overlapping and achieve the appropriate coverage of storage devices. Together, these techniques can avoid the overhead associated with large stripe width, while still being able to combine bandwidth available from many storage devices. We have prototyped these techniques in the ROMIO implementation of MPI-IO. Experimental results indicate that split writing and hierarchical striping can significantly improve the performance of Lustre collective IO in terms of both data transfer and management operations. On a Lustre file system configured with 46 object storage targets, our implementation improves collective write performance of a 16-process job by as much as 220%.
  • Keywords
    application program interfaces; file organisation; input-output programs; message passing; MPI-IO; data management; data transfer; effective collective IO; hierarchical striping; lustre file joining; parallel file system; split writing; storage devices; Application software; Bandwidth; Biology computing; Degradation; File systems; Laboratories; Prototypes; Scalability; Software libraries; Writing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Cluster Computing and the Grid, 2007. CCGRID 2007. Seventh IEEE International Symposium on
  • Conference_Location
    Rio De Janeiro
  • Print_ISBN
    0-7695-2833-3
  • Type

    conf

  • DOI
    10.1109/CCGRID.2007.51
  • Filename
    4215390