Title :
Artificial neural networks in chemotype analysis of Cryptococcus neoformans
Author :
Valafar, Homayoun ; Valafar, Faramarz ; Cherniak, Robert ; Morris, Laura
Author_Institution :
Complex Carbohydrate Res. Center, Georgia Univ., Athens, GA, USA
Abstract :
Peak fitting is one of the popular conventional methods for quantitative analysis of 1H-NMR (proton-nuclear magnetic resonance) spectra in order to establish the serotype or chemotype composition of an antigen. This method of analysis requires human supervision to interpret and manipulate the collected data. Often, due to human error and other factors the results of this analysis are incorrect and unreliable, not mentioning time consuming. A new artificial neural network is developed to automate the same quantitative analysis which previously required human interaction with better precision. ID proton NMR spectra of nearly 100 different strains of Cryptococcus neoformans were used to train and test the network. The results obtained from this network were very comparable and often better than the results of the conventional peak fitting method. The results of neural network however, were produced quickly, without human supervision and thus free of human error
Keywords :
biochemistry; biological NMR; biological techniques; biology computing; cellular biophysics; neural nets; spectral analysis; 1H-NMR spectra analysis; Cryptococcus neoformans; antigen; artificial neural networks; chemotype analysis; human error; opportunistic pathogenic yeast; peak fitting; serotype; Artificial neural networks; Capacitive sensors; Cryptography; Humans; Magnetic analysis; Magnetic resonance; Neural networks; Nuclear magnetic resonance; Protons; Testing;
Conference_Titel :
Biomedical Engineering Days, 1998. Proceedings of the 1998 2nd International Conference
Conference_Location :
Istanbul
Print_ISBN :
0-7803-4242-9
DOI :
10.1109/IBED.1998.710554