Title :
Subspace pursuit for gene profile classificaiton
Author :
Hang, Xiyi ; Dai, Wei ; Wu, Fang-Xiang
Author_Institution :
Dept. of Electr. & Comput. Eng., California State Univ. at Northridge, Northridge, CA, USA
Abstract :
Gene profile classification is achieved by casting the classification problem as finding the sparse representation of testing samples with respect to training samples. The sparse representation is found by subspace pursuit, which is much more efficient than linear programming techniques. The new approach, with no need of model selection, however, still has the performance which can match the best result achieved among all the SVM variants after careful model selection.
Keywords :
bioinformatics; genetics; pattern classification; support vector machines; SVM variants; gene profile classification; model selection; sparse representation; subspace pursuit; Artificial intelligence; Casting; Classification tree analysis; Linear programming; Matrix converters; Mechanical engineering; Sparse matrices; Support vector machine classification; Support vector machines; Testing;
Conference_Titel :
Genomic Signal Processing and Statistics, 2009. GENSIPS 2009. IEEE International Workshop on
Conference_Location :
Minneapolis, MN
Print_ISBN :
978-1-4244-4761-9
Electronic_ISBN :
978-1-4244-4762-6
DOI :
10.1109/GENSIPS.2009.5174349