• DocumentCode
    2693004
  • Title

    Existence conditions for oscillations in cyclic gene regulatory networks with time delay

  • Author

    Takada, Masaaki ; Hori, Yutaka ; Hara, Shinji

  • Author_Institution
    Dept. of Math. Eng. & Inf. Phys., Univ. of Tokyo, Tokyo, Japan
  • fYear
    2010
  • fDate
    8-10 Sept. 2010
  • Firstpage
    830
  • Lastpage
    835
  • Abstract
    In this paper, we present analytic criteria for the existence of oscillations in gene regulatory networks with cyclic structure. In particular, inherent time delays in transcription, translation and translocation process are explicitly treated, and the effects of such time delays are quantitatively revealed. We first show that local instability of the unique equilibrium state results in oscillations of protein concentrations based on the Poincaré-Bendixson theorem for cyclic time delay systems. Then, a scheme of local instability analysis for large-scale time delay systems is introduced, and the analytic criteria for the existence of oscillations are derived. The developed criteria can be applied to cyclic gene regulatory networks consisting of any number of genes, and they are expressed only in terms of biochemical parameters, which lead to fruitful biological insight.
  • Keywords
    delays; oscillations; Poincare-Bendixson theorem; analytic criteria; biochemical parameter; cyclic gene regulatory network; cyclic structure; cyclic time delay system; existence condition; large-scale time delay system; local instability analysis; oscillation; protein concentration; translocation process; unique equilibrium state; Analytical models; Biological system modeling; Degradation; Delay effects; Oscillators; Proteins;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Control Applications (CCA), 2010 IEEE International Conference on
  • Conference_Location
    Yokohama
  • Print_ISBN
    978-1-4244-5362-7
  • Electronic_ISBN
    978-1-4244-5363-4
  • Type

    conf

  • DOI
    10.1109/CCA.2010.5611130
  • Filename
    5611130