DocumentCode
2693004
Title
Existence conditions for oscillations in cyclic gene regulatory networks with time delay
Author
Takada, Masaaki ; Hori, Yutaka ; Hara, Shinji
Author_Institution
Dept. of Math. Eng. & Inf. Phys., Univ. of Tokyo, Tokyo, Japan
fYear
2010
fDate
8-10 Sept. 2010
Firstpage
830
Lastpage
835
Abstract
In this paper, we present analytic criteria for the existence of oscillations in gene regulatory networks with cyclic structure. In particular, inherent time delays in transcription, translation and translocation process are explicitly treated, and the effects of such time delays are quantitatively revealed. We first show that local instability of the unique equilibrium state results in oscillations of protein concentrations based on the Poincaré-Bendixson theorem for cyclic time delay systems. Then, a scheme of local instability analysis for large-scale time delay systems is introduced, and the analytic criteria for the existence of oscillations are derived. The developed criteria can be applied to cyclic gene regulatory networks consisting of any number of genes, and they are expressed only in terms of biochemical parameters, which lead to fruitful biological insight.
Keywords
delays; oscillations; Poincare-Bendixson theorem; analytic criteria; biochemical parameter; cyclic gene regulatory network; cyclic structure; cyclic time delay system; existence condition; large-scale time delay system; local instability analysis; oscillation; protein concentration; translocation process; unique equilibrium state; Analytical models; Biological system modeling; Degradation; Delay effects; Oscillators; Proteins;
fLanguage
English
Publisher
ieee
Conference_Titel
Control Applications (CCA), 2010 IEEE International Conference on
Conference_Location
Yokohama
Print_ISBN
978-1-4244-5362-7
Electronic_ISBN
978-1-4244-5363-4
Type
conf
DOI
10.1109/CCA.2010.5611130
Filename
5611130
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