• DocumentCode
    2716790
  • Title

    Reprogrammable biological logic gate that exploits noise

  • Author

    Dari, Anna ; Bulsara, Adi R. ; Ditto, William L. ; Wang, Xiao

  • Author_Institution
    Sch. of Biol. & Health Syst. Eng., Arizona State Univ., Tempe, AZ, USA
  • fYear
    2011
  • fDate
    10-12 Nov. 2011
  • Firstpage
    337
  • Lastpage
    340
  • Abstract
    Computation underlies the genetic regulatory network activities. Previous studies have designed and engineered systems that can perform single logic gate functionalities, trying to avoid external and internal random fluctuations. In this work, we demonstrate the possibility to exploit noise when it cannot be eliminated. In particular, we adapt the LSR paradigm to a single-gene network derived from the bacteriophage λ and to a more robust two-gene network derived from the yeast S. cerevisiae. Our results demonstrate that in both cases there is an optimal amount of noise where the biological logic gate can be externally reprogrammed (i.e. switch from the AND to the OR gate) and perform well according to the truth table.
  • Keywords
    biomolecular electronics; circuit noise; genetics; logic gates; microorganisms; AND gate; LSR paradigm; OR gate; S. cerevisiae; bacteriophage lambda; external random fluctuations; genetic regulatory network; internal random fluctuations; logic gate functionalities; reprogrammable biological logic gate; single gene network; two gene network derived; Biological system modeling; Degradation; Fluctuations; Logic gates; Noise; Proteins; Switches;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Circuits and Systems Conference (BioCAS), 2011 IEEE
  • Conference_Location
    San Diego, CA
  • Print_ISBN
    978-1-4577-1469-6
  • Type

    conf

  • DOI
    10.1109/BioCAS.2011.6107796
  • Filename
    6107796