DocumentCode
2716790
Title
Reprogrammable biological logic gate that exploits noise
Author
Dari, Anna ; Bulsara, Adi R. ; Ditto, William L. ; Wang, Xiao
Author_Institution
Sch. of Biol. & Health Syst. Eng., Arizona State Univ., Tempe, AZ, USA
fYear
2011
fDate
10-12 Nov. 2011
Firstpage
337
Lastpage
340
Abstract
Computation underlies the genetic regulatory network activities. Previous studies have designed and engineered systems that can perform single logic gate functionalities, trying to avoid external and internal random fluctuations. In this work, we demonstrate the possibility to exploit noise when it cannot be eliminated. In particular, we adapt the LSR paradigm to a single-gene network derived from the bacteriophage λ and to a more robust two-gene network derived from the yeast S. cerevisiae. Our results demonstrate that in both cases there is an optimal amount of noise where the biological logic gate can be externally reprogrammed (i.e. switch from the AND to the OR gate) and perform well according to the truth table.
Keywords
biomolecular electronics; circuit noise; genetics; logic gates; microorganisms; AND gate; LSR paradigm; OR gate; S. cerevisiae; bacteriophage lambda; external random fluctuations; genetic regulatory network; internal random fluctuations; logic gate functionalities; reprogrammable biological logic gate; single gene network; two gene network derived; Biological system modeling; Degradation; Fluctuations; Logic gates; Noise; Proteins; Switches;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Circuits and Systems Conference (BioCAS), 2011 IEEE
Conference_Location
San Diego, CA
Print_ISBN
978-1-4577-1469-6
Type
conf
DOI
10.1109/BioCAS.2011.6107796
Filename
6107796
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