DocumentCode
2721070
Title
ICA-based sparse features recovery from fMRI datasets
Author
Varoquaux, Gaël ; Keller, Merlin ; Poline, Jean-Baptiste ; Ciuciu, Philippe ; Thirion, Bertrand
Author_Institution
Parietal Project Team, INRIA, Saclay-Île de France, France
fYear
2010
fDate
14-17 April 2010
Firstpage
1177
Lastpage
1180
Abstract
Spatial Independent Components Analysis (ICA) is increasingly used in the context of functional Magnetic Resonance Imaging (fMRI) to study cognition and brain pathologies. Salient features present in some of the extracted Independent Components (ICs) can be interpreted as brain networks, but the segmentation of the corresponding regions from ICs is still ill-controlled. Here we propose a new ICA-based procedure for extraction of sparse features from fMRI datasets. Specifically, we introduce a new thresholding procedure that controls the deviation from isotropy in the ICA mixing model. Unlike current heuristics, our procedure guarantees an exact, possibly conservative, level of specificity in feature detection. We evaluate the sensitivity and specificity of the method on synthetic and fMRI data and show that it outperforms state-of-the-art approaches.
Keywords
biomedical MRI; brain; cognition; diseases; feature extraction; image segmentation; independent component analysis; medical image processing; neurophysiology; sensitivity analysis; ICA; ICA mixing model; ROC; brain network; brain pathology; cognition; fMRI dataset; feature detection; functional magnetic resonance imaging; image thresholding; independent components analysis; isotropy; sensitivity; sparse feature extraction; specificity; Brain modeling; Data analysis; Gaussian processes; Independent component analysis; Neuroimaging; Principal component analysis; Signal analysis; Sparse matrices; Testing; Unsupervised learning; ICA; ROC; fMRI; sparse models;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on
Conference_Location
Rotterdam
ISSN
1945-7928
Print_ISBN
978-1-4244-4125-9
Electronic_ISBN
1945-7928
Type
conf
DOI
10.1109/ISBI.2010.5490204
Filename
5490204
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