• DocumentCode
    2721580
  • Title

    Evaluation of effects of JPEG2000 compression on a computer-aided detection system for prostate cancer on digitized histopathology

  • Author

    Doyle, S. ; Monaco, J. ; Madabhushi, Anant ; Lindholm, Stefan ; Ljung, Per ; Ladic, Lance ; Tomaszewski, John ; Feldman, Michael

  • Author_Institution
    Dept. of Biomed. Eng., Rutgers Univ., Piscataway, NJ, USA
  • fYear
    2010
  • fDate
    14-17 April 2010
  • Firstpage
    1313
  • Lastpage
    1316
  • Abstract
    A single digital pathology image can occupy over 10 gigabytes of hard disk space, rendering it difficult to store, analyze, and transmit. Though image compression provides a means of reducing the storage requirement, its effects on CAD (and pathologist) performance are not yet clear. In this work we assess the impact of compression on the ability of a CAD system to detect carcinoma of the prostate (CaP) in histological sections. The CAD algorithm proceeds as follows: Glands in the tissue are segmented using a region-growing algorithm. The size of each gland is then extracted and modeled using a mixture of Gamma distributions. A Markov prior (specifically, a probabilistic pairwise Markov model) is employed to encourage nearby glands to share the same class (i.e. cancerous or non-cancerous). Finally, cancerous glands are aggregated into continuous regions using a distance-hull algorithm. We evaluate CAD performance over 12 images compressed at 14 different compression ratios using JPEG2000. Algorithm performance (measured using the under the receiver operating characteristic curves) remains relatively constant for compression ratios up to 1:256. After this point performance degrades precipitously. We also have an expert pathologist view the compressed images and assign a confidence measure as to their diagnostic fidelity.
  • Keywords
    CAD; Markov processes; biological organs; biological tissues; cancer; data compression; diseases; gamma distribution; image classification; image coding; image segmentation; medical image processing; sensitivity analysis; CAD; CaP; Gamma distribution; JPEG2000 compression; Markov prior model; cancerous gland; carcinoma; computer-aided detection system; digital pathology image; digitized histopathology; distance-hull algorithm; hard disk space; image compression; probabilistic pairwise Markov model; prostate cancer; receiver operating characteristic curves; region-growing algorithm; Cancer detection; Glands; Hard disks; Image analysis; Image coding; Image storage; Pathology; Prostate cancer; Rendering (computer graphics); Transform coding;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2010 IEEE International Symposium on
  • Conference_Location
    Rotterdam
  • ISSN
    1945-7928
  • Print_ISBN
    978-1-4244-4125-9
  • Electronic_ISBN
    1945-7928
  • Type

    conf

  • DOI
    10.1109/ISBI.2010.5490238
  • Filename
    5490238