CellMapBase-an information system supporting high-throughput proteomics for the Cell Map project

Author

Bencsath-Makkai, Zsuzsanna ; Bell, Alex ; Bergeron, John ; Boismenu, Daniel ; Funnell, Robert ; Harrison, Mark ; Mounier, Catherine ; Paiement, Jacques ; Roy, Line ; Kearney, Robert

Author_Institution

Montreal Proteomics Network, Que., Canada

Volume

4

fYear

2003

fDate

17-21 Sept. 2003

Firstpage

3567

Abstract

Information systems supporting the protein discovery process encompass three worlds to model: the world of laboratory experiments, the world of special public libraries, and the world of applicable theories and methods for the derivation, validation and verification of the resulting protein set. In this paper we describe the motivation, the design and certain implementation considerations of CellMapBase, a Web-based, database-driven application designed to support the Cell Map project.

Keywords

medical information systems; proteins; Cell Map project; CellMapBase; applicable methods; applicable theories; database-driven application design; high-throughput proteomics; information system; laboratory experiments; protein discovery process; protein set derivation; protein set validation; protein set verification; special public libraries; Amino acids; Cells (biology); Databases; Fractionation; Information systems; Mass spectroscopy; Peptides; Pipelines; Proteins; Proteomics;

fLanguage

English

Publisher

ieee

Conference_Titel

Engineering in Medicine and Biology Society, 2003. Proceedings of the 25th Annual International Conference of the IEEE

ISSN

1094-687X

Print_ISBN

0-7803-7789-3

Type

conf

DOI

10.1109/IEMBS.2003.1280923

Filename

1280923