• DocumentCode
    2736535
  • Title

    Exploring behaviors of SDE models of biological systems using change of measures

  • Author

    Jha, Sumit Kumar ; Langmead, Christopher James

  • Author_Institution
    Comput. Sci. Dept., Univ. of Central Florida, Orlando, FL, USA
  • fYear
    2011
  • fDate
    3-5 Feb. 2011
  • Firstpage
    111
  • Lastpage
    116
  • Abstract
    We introduce a method for solving the following problem: given a Stochastic Differential Equation (SDE) model describing the dynamics of a biological system, algorithmically decide whether the model satisfies a given high-level behavioral specification. Our proposed solution uses a combination of Bayesian statistical hypothesis testing, Girsanov´s theorem for change of measures, and independent but non-identically distributed (i.i.d.) sampling algorithms. Our use of non-i.i.d. sampling contributes to the state of the art in statistical verification of stochastic systems by providing an effective means for exposing rare events, while retaining the ability to compute bounds on the probability that those events occur.
  • Keywords
    Bayes methods; biology computing; differential equations; probability; stochastic processes; Bayesian statistical hypothesis testing; Girsanov theorem; biological systems; nonidentically distributed sampling algorithms; probability; stochastic differential equation model; stochastic systems; Bayesian methods; Biological system modeling; Computational modeling; Mathematical model; Stochastic processes; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Advances in Bio and Medical Sciences (ICCABS), 2011 IEEE 1st International Conference on
  • Conference_Location
    Orlando, FL
  • Print_ISBN
    978-1-61284-851-8
  • Type

    conf

  • DOI
    10.1109/ICCABS.2011.5729862
  • Filename
    5729862