DocumentCode
2808258
Title
Point-Spread Function retrieval for fluorescence microscopy
Author
Pankajakshan, Praveen ; Blanc-Féraud, Laure ; Kam, Zvi ; Zerubia, Josiane
Author_Institution
ARIANA Project Team, INRIA/I3S, Sophia Antipolis, France
fYear
2009
fDate
June 28 2009-July 1 2009
Firstpage
1095
Lastpage
1098
Abstract
In this paper we propose a method for retrieving the Point Spread Function (PSF) of an imaging system given the observed image sections of a fluorescent microsphere. Theoretically calculated PSFs often lack the experimental or microscope specific signatures while empirically obtained data are either over sized or (and) too noisy. The effect of noise and the influence of the microsphere size can be mitigated from the experimental data by using a Maximum Likelihood Expectation Maximization (MLEM) algorithm. The true experimental parameters can then be estimated by fitting the result to a model based on the scalar diffraction theory with lower order Spherical Aberration (SA). The algorithm was tested on some simulated data and the results obtained validate the usefulness of the approach for retrieving the PSF from measured data.
Keywords
aberrations; biological techniques; expectation-maximisation algorithm; fluorescence; light diffraction; optical microscopy; optical transfer function; MLEM algorithm; fluorescence microscopy; fluorescent microsphere; imaging system PSF retrieval; low order spherical aberration; maximum likelihood expectation maximization; microsphere size effects; noise effects; observed image sections; point spread function; scalar diffraction theory; true experimental parameters; Biological cells; Deconvolution; Detectors; Diffraction; Fluorescence; Image retrieval; Information retrieval; Maximum likelihood estimation; Microscopy; Testing; Expectation Maximization algorithm; deconvolution; fluorescence microscopy; point-spread function; spherical aberration;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Imaging: From Nano to Macro, 2009. ISBI '09. IEEE International Symposium on
Conference_Location
Boston, MA
ISSN
1945-7928
Print_ISBN
978-1-4244-3931-7
Electronic_ISBN
1945-7928
Type
conf
DOI
10.1109/ISBI.2009.5193247
Filename
5193247
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