DocumentCode :
2866903
Title :
Reversal and transposition distance of linear chromosomes
Author :
Walter, Maria Emilia M T ; Dias, Zanoni ; Meidanis, Joao
Author_Institution :
Brasilia Univ., Brazil
fYear :
1998
fDate :
9-11 Sep 1998
Firstpage :
96
Lastpage :
102
Abstract :
In recent years we are seeing increasing interest in research on mutational events acting on large portions of chromosomes. Among these events, a reversal acts on a fragment of a chromosome, reversing the order and orientation of the genes, and a transposition moves fragments from one region to another within a chromosome. We analyze genomes evolving by reversals and transpositions. We present approximation algorithms to compute the reversal and transposition distance for linear permutations, and a lower bound on the reversal and transposition diameter of signed linear permutations
Keywords :
biology computing; cellular biophysics; combinatorial mathematics; genetics; string matching; approximation algorithms; gene orientation; genomes; linear chromosomes; mutational events; reversal; reversals; signed linear permutations; transposition diameter; transposition distance; Approximation algorithms; Bioinformatics; Biological cells; Biology computing; DNA; Ear; Genetic mutations; Genomics; Polynomials; Sequences;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
String Processing and Information Retrieval: A South American Symposium, 1998. Proceedings
Conference_Location :
Santa Cruz de La Sierra
Print_ISBN :
0-8186-8664-2
Type :
conf
DOI :
10.1109/SPIRE.1998.712988
Filename :
712988
Link To Document :
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