• DocumentCode
    2866903
  • Title

    Reversal and transposition distance of linear chromosomes

  • Author

    Walter, Maria Emilia M T ; Dias, Zanoni ; Meidanis, Joao

  • Author_Institution
    Brasilia Univ., Brazil
  • fYear
    1998
  • fDate
    9-11 Sep 1998
  • Firstpage
    96
  • Lastpage
    102
  • Abstract
    In recent years we are seeing increasing interest in research on mutational events acting on large portions of chromosomes. Among these events, a reversal acts on a fragment of a chromosome, reversing the order and orientation of the genes, and a transposition moves fragments from one region to another within a chromosome. We analyze genomes evolving by reversals and transpositions. We present approximation algorithms to compute the reversal and transposition distance for linear permutations, and a lower bound on the reversal and transposition diameter of signed linear permutations
  • Keywords
    biology computing; cellular biophysics; combinatorial mathematics; genetics; string matching; approximation algorithms; gene orientation; genomes; linear chromosomes; mutational events; reversal; reversals; signed linear permutations; transposition diameter; transposition distance; Approximation algorithms; Bioinformatics; Biological cells; Biology computing; DNA; Ear; Genetic mutations; Genomics; Polynomials; Sequences;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    String Processing and Information Retrieval: A South American Symposium, 1998. Proceedings
  • Conference_Location
    Santa Cruz de La Sierra
  • Print_ISBN
    0-8186-8664-2
  • Type

    conf

  • DOI
    10.1109/SPIRE.1998.712988
  • Filename
    712988