Title :
Robustness of neural spike sorting to sampling rate and quantization bit depth
Author :
Ghanbari, Yasser ; Papamichalis, Panos ; Spence, Larry
Author_Institution :
Dept. of Electr. Eng., Southern Methodist Univ., Dallas, TX, USA
Abstract :
Extracellular recording of neural signals records the action potentials of neurons adjacent to the electrode as well as the noise generated by the overall neural activity around the electrode. The spike sorting process, i.e., detection of the noisy spikes in the recorded digital signal, feature extraction, and clustering of the spikes has been investigated extensively since it is a challenging problem for neuroscientists. However, the effects of digitization, including the sampling rate and number of bits, on the above three-stage process have not been investigated. This paper addresses the robustness of the spike sorting procedure to variations in the signal bandwidth, sampling rate, and the number of quantization levels (bit depth). Different signal-to-noise ratios (SNRs) are used and their effects on clustering are studied, when using principal components analysis (PCA) features. The PCA-based features are shown to be robust to quantization bit depth variations while they are quite sensitive to the sampling rate even when it exceeds the Nyquist rate.
Keywords :
bioelectric potentials; feature extraction; medical signal detection; medical signal processing; neurophysiology; principal component analysis; Nyquist rate; action potentials; electrode; feature extraction; neural spike sorting; principal components analysis; quantization bit depth; robustness; sampling rate; signal bandwidth; spike detection; Electrodes; Extracellular; Neurons; Noise generators; Noise robustness; Principal component analysis; Quantization; Sampling methods; Signal sampling; Sorting; Neural data acquisition; action potential; quantization; sampling rate; spike sorting;
Conference_Titel :
Digital Signal Processing, 2009 16th International Conference on
Conference_Location :
Santorini-Hellas
Print_ISBN :
978-1-4244-3297-4
Electronic_ISBN :
978-1-4244-3298-1
DOI :
10.1109/ICDSP.2009.5201163