DocumentCode
2931206
Title
SigMate: A MATLAB-based neuronal signal processing tool
Author
Mahmud, Mufti ; Bertoldo, Alessandra ; Girardi, Stefano ; Maschietto, Marta ; Vassanelli, Stefano
Author_Institution
Dept. of Human Anatomy & Physiol., Univ. of Padova, Padova, Italy
fYear
2010
fDate
Aug. 31 2010-Sept. 4 2010
Firstpage
1352
Lastpage
1355
Abstract
Advances in neuronal probe technology to record brain activity have posed a significant challenge in performing necessary processing and analysis of the recorded data. To be able to infer meaningful conclusions from the recorded signals through these probes, sophisticated signal processing and analysis tools are required. This paper presents a MATLAB-based novel tool, `SigMate´, capable of performing various processing and analysis incorporating the available standard tools and our in-house custom tools. The present features include, data display (2D and 3D), baseline correction, stimulus artifact removal, noise characterization, file operations (file splitter, file concatenator, and file column rearranger), latency estimation, determination of cortical layer activation order, spike detection, spike sorting, and are gradually growing. This tool has been tested extensively for the recordings using the standard micropipettes as well as implantable neural probes based on EOSFETs (Electrolyte-Oxide-Semiconductor Field Effect Transistors) and will be made available to the community shortly.
Keywords
bioelectric phenomena; brain; estimation theory; field effect transistors; mathematics computing; medical signal detection; medical signal processing; neurophysiology; noise; prosthetics; EOSFET; MATLAB; SigMate; baseline correction; brain activity; cortical layer activation order; data display; electrolyte oxide semiconductor field effect transistors; file column rearranger; file concatenator; file splitter; implantable neural probes; in-house custom tools; latency estimation; micropipettes; neuronal probe technology; neuronal signal processing; noise characterization; spike detection; spike sorting; stimulus artifact removal; Estimation; Graphical user interfaces; Noise; Software packages; Sorting; Three dimensional displays; Neuronal signal analysis; Neuronal signal processing; local field potentials; neuronal activity; signal analysis software; Action Potentials; Algorithms; Animals; Neurons; Programming Languages; Rats; Signal Processing, Computer-Assisted; Software;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE
Conference_Location
Buenos Aires
ISSN
1557-170X
Print_ISBN
978-1-4244-4123-5
Type
conf
DOI
10.1109/IEMBS.2010.5626747
Filename
5626747
Link To Document