• DocumentCode
    2968079
  • Title

    Metabolic pathway interface to molecular biology databases

  • Author

    Zeeberg, Barry ; Watanabe, Kevin ; Goto, Susumu ; Overbeek, Ross ; Kerschberg, Larry ; Michaels, George

  • Author_Institution
    George Mason Univ., Fairfax, VA, USA
  • fYear
    1998
  • fDate
    1-3 Jul 1998
  • Firstpage
    238
  • Lastpage
    241
  • Abstract
    We present results of providing database support to biomedicine via federation of SDB Cooperation/Integration based upon the KEGG GUI for molecular biology. The federation provides a common link to three molecular biology databases. The added value of the federation is freedom from consulting multiple references to ascertain the full set of enzymatic reactions in a metabolic pathway, and the option of selecting multiple queries to submit to the federated SDBs. Each of the SDBs is extensive, but incomplete. The union of the SDBs, implemented transparently by the federation, is more complete. Each SDB provides a different approach to the options available for data presentation and a different set of Web server tools for data analysis. Thus, an important part of the added value of the federation is the cross-fertilization available in the union of the molecular biological content, the presentation of data, and the tools available for analysis
  • Keywords
    Internet; biology computing; data analysis; distributed databases; graphical user interfaces; medical information systems; query processing; scientific information systems; KEGG; Web server; biomedicine; data analysis; data presentation; enzyme reactions; federated database; graphical user interface; metabolic pathway; metabolic pathway interface; molecular biology databases; multiple queries; Bioinformatics; Biology computing; Biomedical computing; Biotechnology; Chemical engineering; Informatics; Laboratories; Sequences; Spatial databases; Web server;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Scientific and Statistical Database Management, 1998. Proceedings. Tenth International Conference on
  • Conference_Location
    Capri
  • ISSN
    1099-3371
  • Print_ISBN
    0-8186-8575-1
  • Type

    conf

  • DOI
    10.1109/SSDM.1998.688132
  • Filename
    688132