• DocumentCode
    2969433
  • Title

    Triclustering in gene expression data analysis: A selected survey

  • Author

    Mahanta, P. ; Ahmed, H.A. ; Bhattacharyya, D.K. ; Kalita, Jugal K.

  • Author_Institution
    Dept. of Comput. Sci. & Eng., Tezpur Univ., Napaam, India
  • fYear
    2011
  • fDate
    4-5 March 2011
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    Mining microarray data sets is important in bioinformatics research and biomedical applications. Recently, mining triclusters or 3D clusters in a Gene Sample Time or 3D microarray data is an emerging area of research. Each tricluster contains a subset of genes and a subset of samples such that the genes are coherent on the samples along the time series. There is a scarcity of triclustering algorithms in the literature of microarray data analysis. We review some existing triclustering algorithms and discuss their merits and demerits. Finally we are trying to provide the researcher who are new to this field a base platform by exposing the issues which are still challenging in triclustering through our analysis of these algorithms.
  • Keywords
    bioinformatics; data analysis; data mining; molecular biophysics; pattern clustering; 3D microarray data; bioinformatics; biomedical application; data analysis; gene expression data; gene sample time; microarray data analysis; microarray data mining; triclustering algorithm; Algorithm design and analysis; Clustering algorithms; Coherence; Data mining; Gene expression; Time series analysis; GST data; TRICLUSTER; gTRICLUSTER; triclustering;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Emerging Trends and Applications in Computer Science (NCETACS), 2011 2nd National Conference on
  • Conference_Location
    Shillong
  • Print_ISBN
    978-1-4244-9578-8
  • Type

    conf

  • DOI
    10.1109/NCETACS.2011.5751409
  • Filename
    5751409