• DocumentCode
    3007387
  • Title

    Folding RNA on the Cray-2

  • Author

    Ess, Michael

  • Author_Institution
    Cray Comput. Corp., Colorado Springs, CO, USA
  • fYear
    1990
  • fDate
    12-16 Nov 1990
  • Firstpage
    103
  • Lastpage
    111
  • Abstract
    A C implementation of the stem list method for predicting RNA folding is given for the Cray-2 that takes advantage of both vectorization and multitasking. This implementation of exhaustive, depth first searching may have uses in other applications
  • Keywords
    Cray computers; biology computing; macromolecular configurations; molecular biophysics; parallel processing; pipeline processing; C implementation; Cray-2; RNA folding; depth first searching; multitasking; stem list method; vectorization; Biological system modeling; DNA; Electronic switching systems; Predictive models; Proteins; RNA; Sequences; Shape; Springs; Temperature;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Supercomputing '90., Proceedings of
  • Conference_Location
    New York, NY
  • Print_ISBN
    0-8186-2056-0
  • Type

    conf

  • DOI
    10.1109/SUPERC.1990.130008
  • Filename
    130008
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=3007387