DocumentCode
3025491
Title
Parallel Scale-Transfer in Multiscale MD-FE Coupling Using Remote Memory Access
Author
Krause, Dorian ; Krause, Rolf
Author_Institution
Inst. of Comput. Sci., Univ. delta Svizzera italiana, Lugano, Switzerland
fYear
2011
fDate
5-8 Dec. 2011
Firstpage
66
Lastpage
73
Abstract
We present a novel remote memory access based approach to the parallelization of a coupled Molecular Dynamics-Finite Element (MD/FE) code and its implementation. Such multiscale simulation codes can be used for, e.g., the simulation of localized nonlinear phenomena as fracture in solids. Caused by the dynamic data distribution of MD codes this requires non-standard communication mechanisms. We investigate different implementation options for realizing the scale transfer between MD and FE in parallel. We present benchmark results obtained on three different parallel architectures which give interesting insights into the performance of our new approach. Additionally, we study the scaling of a full coupled code. To the best of our knowledge, these results are the first available scaling results for this kind of heterogeneous code.
Keywords
digital simulation; file organisation; finite element analysis; fracture mechanics; mechanical engineering computing; molecular dynamics method; parallel processing; dynamic data distribution; localized nonlinear phenomena; molecular dynamics finite element code; multiscale MD-FE coupling; multiscale simulation codes; parallel architectures; parallel scale transfer; remote memory access; solid fracture; Arrays; Computational modeling; Couplings; Finite element methods; Indexes; Iron; Vectors; Fracture Mechanics; Global Array; MPI; Multiscale Coupling; Remote Memory Access;
fLanguage
English
Publisher
ieee
Conference_Titel
e-Science Workshops (eScienceW), 2011 IEEE Seventh International Conference on
Conference_Location
Stockholm
Print_ISBN
978-1-4673-0026-1
Type
conf
DOI
10.1109/eScienceW.2011.8
Filename
6130733
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