DocumentCode :
3036782
Title :
Comparative study of feature selection methods on microarray data
Author :
Miyamoto, Takanobu ; Uchimura, Shunji ; Hamamoto, Yoshihiko ; Iizuka, Norio ; Oka, Masaaki ; Yamada-Okabe, Hisafumi
Author_Institution :
Dept. of Comput. Sci. & Syst. Eng., Yamaguchi Univ., Japan
fYear :
2003
fDate :
20-22 Oct. 2003
Firstpage :
82
Lastpage :
83
Abstract :
It is difficult to apply usual statistical pattern recognition techniques directly to microarray data, because the number of genes is too large in comparison with the number of available training samples. Therefore, one needs a powerful feature selection method for microarray data. In this paper, we compare the previously published feature selection method with the sequential forward selection (SFS) method and the Fisher criterion-based feature selection method on the microarray data of hepatocellular carcinoma (http://surgery2.med.yamaguchi-u.ac.jp/research/DNAchip/). Experimental results show that our method outperforms the SFS method and the Fisher criterion-based method in terms of the recognition rate.
Keywords :
biology computing; cancer; cellular biophysics; genetics; liver; pattern recognition; statistical analysis; Fisher criterion-based feature selection; feature selection methods; genes; hepatocellular carcinoma; microarray data; sequential forward selection; statistical pattern recognition; supervised statistical pattern recognition; Computer science; Costs; Covariance matrix; Data engineering; Error analysis; Euclidean distance; Laboratories; Pattern recognition; Surgery; Systems engineering and theory;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Engineering, 2003. IEEE EMBS Asian-Pacific Conference on
Print_ISBN :
0-7803-7943-8
Type :
conf
DOI :
10.1109/APBME.2003.1302594
Filename :
1302594
Link To Document :
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