DocumentCode :
3047272
Title :
Predicting Protein Phosphorylation Sites with Neuralgenetic Network Algorithm
Author :
Tang, Yu-Rong ; Chen, Yong-Zi ; Sheng, Zhi-Ya ; Zhang, Ziding
Author_Institution :
Coll. of Biol. Sci., China Agric. Univ., Beijing
fYear :
2007
fDate :
6-8 July 2007
Firstpage :
111
Lastpage :
114
Abstract :
Protein phosphorylation affects a multitude of cellular signaling processes. By predicting protein phosphorylation sites from primary protein sequences, we can obtain much valuable information that can form the basis for further research. Here, we present a neural-genetic network algorithm that predicts phosphorylation sites in proteins. Aided by a genetic algorithm to optimize the weight values within the neural network ,the new algorithm has demonstrated a high accuracy of 75.1%, 82.7% and 79.2% in predicting the phosphorylated S, T and Y sites, respectively. The prediction system can be applied to other prediction tasks in the field of protein bioinformatics.
Keywords :
biology computing; genetic algorithms; genetics; molecular biophysics; neural nets; proteins; genetic algorithm; neural-genetic network algorithm; optimization; protein bioinformatics; protein phosphorylation sites; Amino acids; Artificial neural networks; Biochemistry; Bioinformatics; Databases; Genetic algorithms; Neural networks; Prediction algorithms; Protein engineering; Signal processing;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Bioinformatics and Biomedical Engineering, 2007. ICBBE 2007. The 1st International Conference on
Conference_Location :
Wuhan
Print_ISBN :
1-4244-1120-3
Type :
conf
DOI :
10.1109/ICBBE.2007.32
Filename :
4272516
Link To Document :
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