• DocumentCode
    3048709
  • Title

    Global Sensitivity Analysis of Cell Signalling Transduction Networks Based on Latin Hypercube Sampling Method

  • Author

    Jia, Jianfang ; Yue, Hong ; Liu, Taiyuan ; Wang, Hong

  • Author_Institution
    Inst. of Autom., Chinese Acad. of Sci., Beijing
  • fYear
    2007
  • fDate
    6-8 July 2007
  • Firstpage
    434
  • Lastpage
    437
  • Abstract
    The dynamic behavior of a cell model is affected by its structural complexity and parametric uncertainties. Two important issues in systems biology are how to quantitatively determine the relationship between system behaviors and parameter variations, and how to study the interactions between parameters. Using an NF-kB signaling pathway model as an example, and assuming that the parameters of this model are independent of each other and obey the identical uniform distribution in the range of variations, the global sensitivity analysis on the system output of NF-kB in the nucleus with respect to parameters is studied by means of the Latin hypercube sampling method. Simulation results demonstrate that the oscillation behavior of the concentration of NF-kB in the nucleus is sensitive to 6 key rate constants, which relates to reactions of IKKBa mRNA degradation, IkBa inducible mRNA synthesis, IKK adaption, constitutive IkBa mRNA translation, IKK-IkBa NF-kB association, and IkBbeta mRNA degradation, respectively.
  • Keywords
    bioelectric phenomena; cellular biophysics; macromolecules; molecular biophysics; physiological models; IKK adaption; cell model; cell signalling transduction networks; global sensitivity analysis; latin hypercube sampling method; mRNA degradation; mRNA synthesis; systems biology; Automation; Biological system modeling; Biological systems; Cells (biology); Degradation; Hypercubes; Sampling methods; Sensitivity analysis; Systems biology; Uncertainty;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering, 2007. ICBBE 2007. The 1st International Conference on
  • Conference_Location
    Wuhan
  • Print_ISBN
    1-4244-1120-3
  • Type

    conf

  • DOI
    10.1109/ICBBE.2007.114
  • Filename
    4272598