• DocumentCode
    3062041
  • Title

    Stochastic probability landscape model for switching efficiency, robustness, and differential threshold for induction of genetic circuit in phage λ

  • Author

    Cao, Youfang ; Lu, Hsiao-Mei ; Liang, Jie

  • Author_Institution
    Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, 200240, China
  • fYear
    2008
  • fDate
    20-25 Aug. 2008
  • Firstpage
    611
  • Lastpage
    614
  • Abstract
    The genetic switch of phage lambda provides a paradigm for studying developmental biology and cell fate. Although there have been numerous experimental and theoretical studies, the mechanisms for switching efficiency, stability and robustness, maintenance of lysogenic state, and the induction lytic state are not fully understood. In this paper, a new method is adopted to account for the full stochasticity typical in small copy events and the exact steady state probability landscape of the genetic circuit of the switch network is computed. The stability and sensitivity of phage λ switch and its robustness against perturbations derived from our model for wild type and mutants are consistent with experimental data. Our study has revealed likely mechanism of the phage switch network that was previously unknown.
  • Keywords
    Biological system modeling; Cells (biology); Circuit stability; Genetics; Robust stability; Robustness; Steady-state; Stochastic processes; Switches; Switching circuits; Bacteriophage lambda; Computer Simulation; DNA Viruses; Gene Expression Regulation, Viral; Lysogeny; Models, Genetic; Promoter Regions, Genetic; Virus Activation;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE
  • Conference_Location
    Vancouver, BC
  • ISSN
    1557-170X
  • Print_ISBN
    978-1-4244-1814-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2008.4649227
  • Filename
    4649227