DocumentCode
3062041
Title
Stochastic probability landscape model for switching efficiency, robustness, and differential threshold for induction of genetic circuit in phage λ
Author
Cao, Youfang ; Lu, Hsiao-Mei ; Liang, Jie
Author_Institution
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, 200240, China
fYear
2008
fDate
20-25 Aug. 2008
Firstpage
611
Lastpage
614
Abstract
The genetic switch of phage lambda provides a paradigm for studying developmental biology and cell fate. Although there have been numerous experimental and theoretical studies, the mechanisms for switching efficiency, stability and robustness, maintenance of lysogenic state, and the induction lytic state are not fully understood. In this paper, a new method is adopted to account for the full stochasticity typical in small copy events and the exact steady state probability landscape of the genetic circuit of the switch network is computed. The stability and sensitivity of phage λ switch and its robustness against perturbations derived from our model for wild type and mutants are consistent with experimental data. Our study has revealed likely mechanism of the phage switch network that was previously unknown.
Keywords
Biological system modeling; Cells (biology); Circuit stability; Genetics; Robust stability; Robustness; Steady-state; Stochastic processes; Switches; Switching circuits; Bacteriophage lambda; Computer Simulation; DNA Viruses; Gene Expression Regulation, Viral; Lysogeny; Models, Genetic; Promoter Regions, Genetic; Virus Activation;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, 2008. EMBS 2008. 30th Annual International Conference of the IEEE
Conference_Location
Vancouver, BC
ISSN
1557-170X
Print_ISBN
978-1-4244-1814-5
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2008.4649227
Filename
4649227
Link To Document