Title :
Application of growing self-organizing map to distinguish between finger tapping and non tapping from brain images
Author :
Pin Huang ; Pathirana, Pubudu ; Alahakoon, D. ; Brotchie, P.
Author_Institution :
Sch. of Eng., Deakin Univ., Geelong, VIC, Australia
Abstract :
Growing self-organizing map (GSOM) has been characterized as a knowledge discovery visualization application which outshines the traditional self-organizing map (SOM) due to its dynamic structure in which nodes can grow based on the input data. GSOM is utilized as a visualization tool in this paper to cluster fMRI finger tapping and non- tapping data, demonstrating the visualization capability to distinguish between tapping or non-tapping. A unique feature of GSOM is a parameter called the spread factor whose functionality is to control the spread of the GSOM map. By setting different levels of spread factor, different granularities of region of interests within tapping or non-tapping images can be visualized and analyzed. Euclidean distance based similarity calculation is used to quantify the visualized difference between tapping and non tapping images. Once the differences are identified, the spread factor is used to generate a more detailed view of those regions to provide a better visualization of the brain regions.
Keywords :
biomedical MRI; brain; data mining; data visualisation; image segmentation; medical image processing; pattern clustering; self-organising feature maps; Euclidean distance-based similarity calculation; GSOM map; brain region images; dynamic structure; fMRI finger nontapping data cluster; fMRI finger tapping data cluster; growing self-organizing map; knowledge discovery visualization application; region-of-interest granularities; spread factor levels; Brain; Data visualization; Educational institutions; Electronic mail; Magnetic resonance imaging; Thumb;
Conference_Titel :
Information and Automation for Sustainability (ICIAfS), 2012 IEEE 6th International Conference on
Conference_Location :
Beijing
Print_ISBN :
978-1-4673-1976-8
DOI :
10.1109/ICIAFS.2012.6419909