Title :
Multicenter Data Sharing for Collaboration in Sleep Medicine
Author :
Beier, Maximilian ; Jansen, Christoph ; Mayer, Geert ; Penzel, Thomas ; Rodenbeck, Andrea ; Siewert, Rene ; Jie Wu ; Krefting, Dagmar
Author_Institution :
Univ. of Appl. Sci. Berlin, Berlin, Germany
Abstract :
Clinical Sleep Research is an inherent multidisciplinary field, as many health issues may affect a person\´s sleep conditions and sleep disorders may cause several health problems. Many patients with chronic sleep disorders suffer from different further medical conditions - called multimorbidity. Due to the high variety of the reasons and the courses of sleep disorders, individual cases are difficult to compare. Therefore there is a high demand for sleep researchers to collaborate with each other to reach necessary participant numbers and multidisciplinary expertise. To date, inter-institutional sleep research is poorly supported by IT systems. In particular the heterogeneity and the quality variations within the acquired bio signal data - caused by different bio signal recorders or different measurement procedures - are impeding common bio signal data processing. In this manuscript we introduce a virtual research platform supporting inter-institutional data sharing and processing. The infrastructure is based on XNAT - a free and open-source neuroimaging research platform - a loosely coupled service oriented architecture and scalable virtualization in the backend. The system is capable of local pseudonymization of bio signal data, mapping to a standardized set of parameters and automatic quality assessment. Terms and quality measures are derived from the "Manual for the Scoring of Sleep and Associated Events" of the American Academy of Sleep Medicine, the de-facto standard for diagnostic bio signal analysis in sleep medicine.
Keywords :
medical signal processing; public domain software; service-oriented architecture; sleep; virtualisation; IT systems; XNAT; automatic quality assessment; bio signal analysis; bio signal data processing; bio signal recorders; chronic sleep disorders; health problems; inter-institutional data processing; inter-institutional data sharing; inter-institutional sleep research; local pseudonymization; loosely coupled service oriented architecture; measurement procedures; multicenter data sharing; multimorbidity medical conditions; open-source neuroimaging research platform; person sleep conditions; quality measures; quality variations; scalable virtualization; sleep medicine; virtual research platform; Bioinformatics; Electroencephalography; Pipelines; Security; Sleep apnea; User interfaces; Cloud; OpenStack; REST; XNAT; biosignal; polysomnography; sleep;
Conference_Titel :
Cluster, Cloud and Grid Computing (CCGrid), 2015 15th IEEE/ACM International Symposium on
Conference_Location :
Shenzhen
DOI :
10.1109/CCGrid.2015.148