• DocumentCode
    3106800
  • Title

    CADViST: Visualization Tool for BLAST Alignment of Dengue Virus Sequences

  • Author

    Viriyasaksathian, Boonyarat ; Wongsawat, Yodchanan ; Suriyaphol, Prapat

  • Author_Institution
    Dept. of Biomed. Eng., Mahidol Univ., Nakornpathom, Thailand
  • fYear
    2010
  • fDate
    18-20 June 2010
  • Firstpage
    1
  • Lastpage
    4
  • Abstract
    Exploration of the search engine that can simultaneously visualize the genomic sequences is one of the challenging problems. In this paper, we propose the software, called CADViST. The UnitX graphical representation (previously proposed by the authors) is employed as the alternative tool to visualize the result obtained from the Basic Local Alignment Search Tool (BLAST). The proposed software can efficiently help the users/experts to easily interpret the results, especially in Dengue virus sequence analysis where different serotypes or subtypes need to be distinguished.
  • Keywords
    bioinformatics; data visualisation; genomics; microorganisms; molecular biophysics; search engines; software tools; BLAST; CADViST; UnitX graphical representation; basic local alignment search tool; bioinformatics; dengue virus sequence; genomic sequence; visualization tool; Bioinformatics; Biomedical engineering; DNA; Data visualization; Discrete Fourier transforms; Displays; Fourier transforms; Genomics; Sequences; Spectrogram;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering (iCBBE), 2010 4th International Conference on
  • Conference_Location
    Chengdu
  • ISSN
    2151-7614
  • Print_ISBN
    978-1-4244-4712-1
  • Electronic_ISBN
    2151-7614
  • Type

    conf

  • DOI
    10.1109/ICBBE.2010.5515779
  • Filename
    5515779