Title :
Quantitative Susceptibility Map Reconstruction via a Total Generalized Variation Regularization
Author :
Yanez, Felipe ; Fan, Angie ; Bilgic, Berkin ; Milovic, Carlos ; Adalsteinsson, Elfar ; Irarrazaval, Pablo
Author_Institution :
Dept. of Electr. Eng., Pontificia Univ. Catolica de Chile, Santiago, Chile
Abstract :
Quantitative susceptibility mapping (QSM) is a last decade new concept which allows to determine the magnetic susceptibility distribution of tissue in-vivo. Nowadays it has several applications such as venous blood oxygenation and iron concentration quantification. To reconstruct high quality maps, a regularized scheme must be used to solve this ill-posed problem, due to the dipole kernel under sampling k-space. A widely used regularization penalty is Total Variation (TV), however, we can find stair casing artifacts in reconstructions due to the assumption that images are piecewise constant, not always true in MRI. In this sense, we propose a less restrictive functional, to avoid this problem and to improve QSM quality. A second order Total Generalized Variation (TGV) does not assume piecewise constancy in the images and is equivalent to TV in terms of edge preservation and noise removal. This work describes how TGV penalty addresses an increase in imaging efficiency in magnetic susceptibility maps from numerical phantom and in-vivo data. Currently, we report higher specificity with the proposed regularization. Moreover, the robustness of TGV suggest that is a possible alternative to tissue susceptibility mapping.
Keywords :
Fourier transforms; biological tissues; biomedical MRI; edge detection; image denoising; image reconstruction; image sampling; magnetic susceptibility; medical image processing; Fourier transform operator; dipole kernel; edge preservation; iron concentration quantification; magnetic susceptibility distribution; noise removal; numerical phantom; quantitative susceptibility map reconstruction; regularization penalty; regularized scheme; sampling k-space; stair casing artifacts; tissue in-vivo; tissue susceptibility mapping; total generalized variation regularization; venous blood oxygenation; Biomedical imaging; Equations; Image reconstruction; Magnetic resonance; Magnetic resonance imaging; Magnetic susceptibility; TV; Brain; Quantitative susceptibility mapping; Total Generalized Variation;
Conference_Titel :
Pattern Recognition in Neuroimaging (PRNI), 2013 International Workshop on
Conference_Location :
Philadelphia, PA
DOI :
10.1109/PRNI.2013.59