Title :
Lossless Microarray Image Compression Based on Foreground Extraction
Author :
Banaei, Anahita ; Samavi, Shadrokh ; Nasr-Esfahani, E. ; Shirani, Shahram
Author_Institution :
Dept. of ECE, Isfahan Univ. of Technol.
Abstract :
Microarray technology is a recent and powerful tool for concurrent monitoring of large number of genes expressions. Every microarray experiment produces hundreds of images. Each digital image requires a large storage space. Hence, real-time processing of these images and transmission of them necessitates efficient and custom-made lossless compression schemes. In this paper, we offer a new architecture for lossless compression of microarray images. In this architecture, we have used a dedicated hardware for separation of foreground pixels from the background ones. By separating these pixels and using pipeline architecture, a higher lossless compression ratio has been achieved as compared to other existing methods
Keywords :
DNA; data compression; feature extraction; genetics; image coding; medical image processing; real-time systems; DNA; foreground extraction; gene expression; microarray image compression; pipeline architecture; Blood; Cells (biology); DNA; Fluorescence; Genetic expression; Image coding; Pixel; Probes; Sequences; Space technology; DNA; image compression; image processing; microarray; pipeline;
Conference_Titel :
Electrical and Computer Engineering, 2006. CCECE '06. Canadian Conference on
Conference_Location :
Ottawa, Ont.
Print_ISBN :
1-4244-0038-4
Electronic_ISBN :
1-4244-0038-4
DOI :
10.1109/CCECE.2006.277514