• DocumentCode
    3134937
  • Title

    Lossless Microarray Image Compression Based on Foreground Extraction

  • Author

    Banaei, Anahita ; Samavi, Shadrokh ; Nasr-Esfahani, E. ; Shirani, Shahram

  • Author_Institution
    Dept. of ECE, Isfahan Univ. of Technol.
  • fYear
    2006
  • fDate
    38838
  • Firstpage
    106
  • Lastpage
    109
  • Abstract
    Microarray technology is a recent and powerful tool for concurrent monitoring of large number of genes expressions. Every microarray experiment produces hundreds of images. Each digital image requires a large storage space. Hence, real-time processing of these images and transmission of them necessitates efficient and custom-made lossless compression schemes. In this paper, we offer a new architecture for lossless compression of microarray images. In this architecture, we have used a dedicated hardware for separation of foreground pixels from the background ones. By separating these pixels and using pipeline architecture, a higher lossless compression ratio has been achieved as compared to other existing methods
  • Keywords
    DNA; data compression; feature extraction; genetics; image coding; medical image processing; real-time systems; DNA; foreground extraction; gene expression; microarray image compression; pipeline architecture; Blood; Cells (biology); DNA; Fluorescence; Genetic expression; Image coding; Pixel; Probes; Sequences; Space technology; DNA; image compression; image processing; microarray; pipeline;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Electrical and Computer Engineering, 2006. CCECE '06. Canadian Conference on
  • Conference_Location
    Ottawa, Ont.
  • Print_ISBN
    1-4244-0038-4
  • Electronic_ISBN
    1-4244-0038-4
  • Type

    conf

  • DOI
    10.1109/CCECE.2006.277514
  • Filename
    4054589