• DocumentCode
    3203159
  • Title

    A UNICORE Plugin for HPC-Enabled Scientific Workflows in Taverna 2.2

  • Author

    Holl, Sonja ; Zimmermann, Olav ; Hofmann-Apitius, Martin

  • Author_Institution
    Juelich Supercomput. Center (JSC), Forschungszentrum Juelich, Julich, Germany
  • fYear
    2011
  • fDate
    4-9 July 2011
  • Firstpage
    220
  • Lastpage
    223
  • Abstract
    As scientific workflows are becoming more complex and apply compute-intensive methods to increasingly large data volumes, access to HPC resources is becoming mandatory. We describe the development of a novel plug in for the Tavern a workflow system, which provides transparent and secure access to HPC/grid resources via the UNICORE grid middleware, while maintaining the ease of use that has been the main reason for the success of scientific workflow systems. A use case from the bioinformatics domain demonstrates the potential of the UNICORE plug in for Tavern a by creating a scientific workflow that executes the central parts in parallel on a cluster resource.
  • Keywords
    bioinformatics; grid computing; mainframes; middleware; parallel machines; security of data; software tools; workflow management software; HPC resources; Taverna 2.2; UNICORE Plugin; UNICORE grid middleware; bioinformatics; cluster resource; compute-intensive methods; grid resources; large data volumes; scientific workflow systems; secure access; Bioinformatics; Computer architecture; Databases; Middleware; Monitoring; Servers; Support vector machines; Grid; Taverna; UNICORE; Workflow;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Services (SERVICES), 2011 IEEE World Congress on
  • Conference_Location
    Washington, DC
  • Print_ISBN
    978-1-4577-0879-4
  • Electronic_ISBN
    978-0-7695-4461-8
  • Type

    conf

  • DOI
    10.1109/SERVICES.2011.46
  • Filename
    6012717