• DocumentCode
    3221630
  • Title

    Classification gel electrophoretic image of DNA Fusarium Graminearum featuring support vector machine

  • Author

    Alias, N. ; Nashat, S. ; Zakaria, L. ; Najimudin, N. ; Abdullah, M.Z.

  • Author_Institution
    Sch. of Electr. & Electron. Eng., Univ. Sains Malaysia, Nibong Tebal, Malaysia
  • fYear
    2011
  • fDate
    16-18 Nov. 2011
  • Firstpage
    109
  • Lastpage
    114
  • Abstract
    Fusarium Graminearum is best known as plant pathongen and most commonly found on cereal grains, wheat and barley. It has the detrimental interactions with various grains, causing numerous diseases such as gibberella ear rot and head blight. This study is to detect the presence of F. Graminearum in plant via image processing and artificial intelligence. The standard DNA gel electrophoresis procedures are used in image formation while machine learning is achieved by means of homomorphic filtering and support vector machine (SVM). Meanwhile the Gray Level Co-occurrence Matrix (GLCM) is used in feature extraction. On average, the methods and procedures returned a correct classification rate of more than 97%, with both sensitivity and specificity of 97.5%. This study paves the way for development of an imaging system to detect other types of pathogenic microbes in plants and food materials electronically.
  • Keywords
    DNA; biology computing; botany; electrophoresis; feature extraction; image classification; learning (artificial intelligence); matrix algebra; plant diseases; support vector machines; DNA fusarium graminearum; DNA gel electrophoresis procedures; artificial intelligence; barley; cereal grains; diseases; feature extraction; food materials; gel electrophoretic image classification; gibberella ear rot; gray level co-occurrence matrix; head blight; homomorphic filtering; image formation; image processing; machine learning; pathogenic microbes; plant pathongen; support vector machine; wheat; Accuracy; DNA; Feature extraction; Maximum likelihood detection; Nonlinear filters; Support vector machines; Gel electrophoresis image; Gray; Homomorphic filter; Level Co-occurrence Matrix (GLCM); Support Vector Machine (SVM);
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Signal and Image Processing Applications (ICSIPA), 2011 IEEE International Conference on
  • Conference_Location
    Kuala Lumpur
  • Print_ISBN
    978-1-4577-0243-3
  • Type

    conf

  • DOI
    10.1109/ICSIPA.2011.6144122
  • Filename
    6144122