• DocumentCode
    3228288
  • Title

    GRISSOM web based grid portal: Exploiting the power of grid infrastructure for the interpretation and storage of DNA microarray experiments

  • Author

    Chatziioannou, Aristotelis ; Moulos, Panagiotis ; Pilalis, Eleftherios ; Kolisis, Fragiskos ; Kanaris, Ioannis ; Maglogiannis, Ilias ; Doukas, Charalampos

  • Author_Institution
    Inst. of Biol. Res. & Biotechnol., Nat. Hellenic Res. Found., Athens, Greece
  • fYear
    2009
  • fDate
    4-7 Nov. 2009
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    DNA Microarrays have dramatically reshaped modern biological research by deriving profiles of genome-wide expression of living organisms, and producing an unprecedented wealth of quantitative data. Given this characteristic, microarray experiments are considered high-throughput both in terms of data (data intensive) and processing (computationally intensive). GRISSOM enables exploitation of GRID resources for DNA microarray distributed processing. It provides experts with a complete web-based solution for managing, searching and disseminating biological knowledge in the context of gene expression patterns on a genomic scale. The platform is developed and deployed using open source software components. Through the use of web service technologies (WSDL language) GRISSOM can be encapsulated in other biomedical processing workflows, thus rendering access to its algorithms, transparent and generic.
  • Keywords
    DNA; Web services; biology computing; genetics; genomics; grid computing; high level languages; portals; DNA microarray; GRISSOM; WSDL language; Web service; biological knowledge; biological research; gene expression patterns; genome-wide expression; grid infrastructure; grid portal; Bioinformatics; Biology computing; DNA; Distributed processing; Gene expression; Genomics; Knowledge management; Open source software; Organisms; Portals; GRISSOM; Grid Portal; Grid Web Services; Microarray analysis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on
  • Conference_Location
    Larnaca
  • Print_ISBN
    978-1-4244-5379-5
  • Electronic_ISBN
    978-1-4244-5379-5
  • Type

    conf

  • DOI
    10.1109/ITAB.2009.5394410
  • Filename
    5394410