Title :
DBComposer: An R package for integrative analysis and management of gene expression microarray data
Author :
Lingjia Kong ; Aho, Kaisa-Leena ; Granberg, Kirsi ; Roos, Clement ; Autio, Reija
Author_Institution :
Dept. of Signal Process., Tampere Univ. of Technol., Tampere, Finland
Abstract :
DBComposer is an R package with a graphical user interface (GUI) to analyze and integrate human gene expression microarray data. With DBComposer, the data can be easily annotated, preprocessed and analyzed in several ways. DBComposer can also serve as a personal expression microarray database allowing users to store multiple datasets together for later retrieval or data analysis. It takes advantage of many R packages for statistics and visualizations, and provides a flexible framework to implement custom workflows to extend the data analysis capabilities.
Keywords :
biology computing; data analysis; data integration; database management systems; graphical user interfaces; DBComposer; GUI; R package; custom workflows; gene expression microarray data integrative analysis; gene expression microarray data management; graphical user interface; personal expression microarray database; Bioinformatics; Data analysis; Databases; Gene expression; Graphical user interfaces; Software; Statistical analysis;
Conference_Titel :
Genomic Signal Processing and Statistics (GENSIPS), 2013 IEEE International Workshop on
Conference_Location :
Houston, TX
Print_ISBN :
978-1-4799-3461-4
DOI :
10.1109/GENSIPS.2013.6735944