Title :
Analysis of spontaneous activity in cultured brain tissue using the discrete wavelet transform
Author :
Johnson, J.D. ; Plenz, D. ; Beggs, J. ; Li, W. ; Mieier, M. ; Miltner, N. ; Owen, K.
Author_Institution :
Dept. of Bioeng., Toledo Univ., OH, USA
Abstract :
Multi-microelectrode array devices can be used to simultaneously record activity from multiple neurons distributed in a tissue slice. One of the brain functions being investigated with microelectrode arrays is the periodic behavior of spontaneously active neurons in the cortex and basal ganglia.. However, these recording methods generate several hundred megabytes of data per hour and, currently, there is no efficient and accurate approach for the identification of the repeated pattern. We present an approach that uses the discrete wavelet transform to accelerate identification of repeating patterns of neural activity. We perform match filtering on the coefficient data, not the time-domain data. Our wavelet approach operates on 1/4 the data but provides similar classification abilities as the time domain correlation.
Keywords :
arrays; bioelectric potentials; brain; cellular biophysics; discrete wavelet transforms; matched filters; microelectrodes; neurophysiology; basal ganglia; cerebral cortex; classification abilities; cultured brain tissue; match filtering; repeated pattern identification; spontaneous activity analysis; spontaneously active neurons; time domain correlation; time-domain data; tissue slice; Acceleration; Basal ganglia; Brain; Discrete wavelet transforms; Filtering; Matched filters; Microelectrodes; Neurons; Time domain analysis; Wavelet analysis;
Conference_Titel :
Bioinformatics and Bioengineering, 2003. Proceedings. Third IEEE Symposium on
Print_ISBN :
0-7695-1907-5
DOI :
10.1109/BIBE.2003.1188930