• DocumentCode
    3343552
  • Title

    RNA-Seq UD: A bioinformatics plattform for RNA-Seq analysis

  • Author

    Ramirez, Miguel ; Rojas-Quintero, Cristian Alejandro ; Vera-Parra, Nelson Enrique

  • Author_Institution
    Grupo de Investig. GICOGE, Univ. Distrital Francisco Jose de Caldas, Bogota, Colombia
  • fYear
    2015
  • fDate
    17-20 June 2015
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    In this work is presented a process of design and building of a software that gather the tools required for a RNA-Seq data bioinformatics research. From the proposed a workflow is proposed that represents all a process that goes through the main stages of the treatment of transcriptomic and next generation sequencing data, such as preprocessing, mapping, assembly, annotation, and differential expression; Creating a platform of integral works and user-friendly that facilitates the work of researchers in the transcriptomic area.
  • Keywords
    RNA; bioinformatics; software engineering; RNA-Seq UD analysis; bioinformatics platform; next generation sequencing data; software design; transcriptomic treatment; Assembly; Bioinformatics; Genomics; Sequential analysis; Software; Bioinformatics; Next Generation Sequencing; Transcriptomics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information Systems and Technologies (CISTI), 2015 10th Iberian Conference on
  • Conference_Location
    Aveiro
  • Type

    conf

  • DOI
    10.1109/CISTI.2015.7170565
  • Filename
    7170565