Title :
Fuzzy vector filters for microarray image enhancement
Author :
Lukac, R. ; Plataniotis, K.N. ; Smolka, B. ; Venetsanopoulos, A.N.
Author_Institution :
Dept. of Electr. & Comput. Eng., Toronto Univ., Ont., Canada
Abstract :
In this paper, the images of gene chips (microarray images) are enhanced applying the vector fuzzy filtering framework. Using a generalized fuzzy concept, we adaptively determine weights in the filtering structure and provide different filter designs. The strong potential of fuzzy adaptive filters for microarray image enhancement is illustrated with several examples. We demonstrate that the fuzzy vector filters are capable of reducing outliers present in microarray images and simultaneously preserve the spot edges. This can significantly help in spot detection and estimation of the gene expression level.
Keywords :
DNA; adaptive filters; edge detection; filtering theory; fuzzy logic; fuzzy set theory; image denoising; image enhancement; medical image processing; DNA; edge detection; fuzzy adaptive filters; fuzzy set theory; fuzzy vector filters; gene chips; gene expression level estimation; image denoising; microarray image enhancement; spot detection; Adaptive filters; Additive noise; DNA; Filtering; Fluorescence; Gene expression; Glass; Image edge detection; Image enhancement; Laboratories;
Conference_Titel :
Circuits and Systems, 2004. ISCAS '04. Proceedings of the 2004 International Symposium on
Print_ISBN :
0-7803-8251-X
DOI :
10.1109/ISCAS.2004.1328937