• DocumentCode
    3394275
  • Title

    Steady-state analysis of genetic regulatory networks modeled by nonlinear ordinary differential equations

  • Author

    Wang, Haixin ; Qian, Lijun ; Dougherty, Edward R.

  • Author_Institution
    Dept. of Math. & Comput. Sci., Fort Valley State Univ., Fort Valley, GA
  • fYear
    2009
  • fDate
    March 30 2009-April 2 2009
  • Firstpage
    182
  • Lastpage
    185
  • Abstract
    Although Ordinary Differential Equations (ODEs) have been used to model Genetic Regulatory Networks (GRNs) in many previous works, their steady-state behaviors are not well studied. However, a phenotype corresponds to a steady-state gene expression pattern and steady-state analysis of GRNs can provide valuable information on the stability of the GRNs, insights into cellular regulatory mechanisms underlying disease development as well as possible interventions for disease control. In this study, the steady-state behaviors of the nonlinear GRN models are analyzed based on time series data. The steady-state solutions and stability of nonlinear GRNs including polynomial model, sigmoidal model and S-system model are discussed in details.
  • Keywords
    cellular biophysics; diseases; genetics; molecular biophysics; nonlinear differential equations; S-system model; cellular regulatory mechanisms; disease control; disease development; genetic regulatory networks; nonlinear ordinary differential equation; sigmoidal model; steady-state GRN analysis; steady-state gene expression pattern; Differential equations; Diseases; Gene expression; Genetics; Information analysis; Pattern analysis; Polynomials; Stability analysis; Steady-state; Time series analysis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Intelligence in Bioinformatics and Computational Biology, 2009. CIBCB '09. IEEE Symposium on
  • Conference_Location
    Nashville, TN
  • Print_ISBN
    978-1-4244-2756-7
  • Type

    conf

  • DOI
    10.1109/CIBCB.2009.4925726
  • Filename
    4925726